张雷课题组致力于整合患者和小鼠模型的单细胞多组学分析及体内外功能研究，以从分子和细胞层面解析肿瘤以及免疫相关疾病的发病机理，探究免疫疗法的响应及抵抗机制，探索肿瘤发生/治疗响应相关细胞的功能及下一代靶向策略。

Lei Zhang#; Xin Yu#; Liangtao Zheng#; Yuanyuan Zhang#; Yansen Li; Qiao Fang; Ranran Gao; Boxi Kang; Qiming Zhang; Julie Y. Huang; Hiroyasu Konno; Xinyi Guo; Yingjiang Ye; Songyuan Gao; Shan Wang; Xueda Hu; Xianwen Ren; Zhanlong Shen*; Wenjun Ouyang*; Zemin Zhang*; Lineage tracking reveals dynamic relationships of T cells in colorectal cancer. Nature, 2018, 564(7735): 268-272.  

Lei Zhang; Zemin Zhang*; Recharacterizing tumor-infiltrating lymphocytes by single-cell RNA sequencing. Cancer Immunology Research, 2019, 7(7): 1040-1046.    

Lei Zhang#; Ziyi Li#; Katarzyna M. Skrzypczynska#; Qiao Fang; Wei Zhang; Sarah A. O'Brien; Yao He; Lynn Wang; Qiming Zhang; Aeryon Kim; Ranran Gao; Jessica Orf; Tao Wang; Deepali Sawant; Jiajinlong Kang; Dev Bhatt; Daniel Lu; Chi-Ming Li; Aaron S. Rapaport; Kristy Perez; Yingjiang Ye; Shan Wang; Xueda Hu; Xianwen Ren; Wenjun Ouyang; Zhanlong Shen*; Jackson G. Egen*; Zemin Zhang*; Xin Yu*; Single-cell analyses inform mechanisms of myeloid-targeted therapies in colon cancer. Cell, 2020, 181(2): 442-459.   

Xianwen Ren#; Lei Zhang#; Yuanyuan Zhang; Ziyi Li; Nathan Siemers; Zemin Zhang*; Insights gained from single-cell analysis of immune cells in the tumor microenvironment. Annual Review of Immunology, 2021, 39: 583-609.

Hu Nie; Peilu Lin; Yu Zhang; Yihong Wan; Jiesheng Li; Chengqian Yin; Lei Zhang*; Single-cell meta-analysis of inflammatory bowel disease with scIBD. Nature Computational Science, 2023, 3: 522–531.